Integrate engine into application prototype #15
@ -3,5 +3,6 @@
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# https://jonalmeida.com/posts/2015/01/23/print-cargo/
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#
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cargo test -- --nocapture engine::tests::irisawa_hexlet_test
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cargo test -- --nocapture engine::tests::three_spheres_example
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cargo test -- --nocapture engine::tests::point_on_sphere_example
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@ -37,7 +37,7 @@ pub fn sphere_with_offset(dir_x: f64, dir_y: f64, dir_z: f64, off: f64, curv: f6
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struct MatrixEntry {
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index: (usize, usize),
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val: f64
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value: f64
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}
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struct PartialMatrix(Vec<MatrixEntry>);
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@ -56,7 +56,7 @@ impl PartialMatrix {
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let mut result = DMatrix::<f64>::zeros(rhs.nrows(), rhs.ncols());
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let PartialMatrix(entries) = self;
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for ent in entries {
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result[ent.index] = ent.val - rhs[ent.index];
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result[ent.index] = ent.value - rhs[ent.index];
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}
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result
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}
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@ -141,7 +141,7 @@ fn realize_gram(
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let total_dim = element_dim * assembly_dim;
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// scale the tolerance
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let scale_adjustment = ((guess.ncols() - frozen.len()) as f64).sqrt();
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let scale_adjustment = (gram.0.len() as f64).sqrt();
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let tol = scale_adjustment * scaled_tol;
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// convert the frozen indices to stacked format
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@ -153,8 +153,8 @@ fn realize_gram(
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let mut state = SearchState::from_config(gram, guess);
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for _ in 0..max_descent_steps {
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// stop if the loss is tolerably low
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println!("loss: {}", state.loss);
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/*println!("projected error: {}", state.err_proj);*/
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println!("scaled loss: {}", state.loss / scale_adjustment);
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/* println!("projected error: {}", state.err_proj); */
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if state.loss < tol { break; }
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// find the negative gradient of the loss function
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@ -182,6 +182,7 @@ fn realize_gram(
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// regularize the Hessian
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let min_eigval = hess.symmetric_eigenvalues().min();
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/* println!("lowest eigenvalue: {}", min_eigval); */
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if min_eigval <= 0.0 {
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hess -= reg_scale * min_eigval * DMatrix::identity(total_dim, total_dim);
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}
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@ -198,6 +199,12 @@ fn realize_gram(
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}
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// compute the Newton step
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/*
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we need to either handle or eliminate the case where the minimum
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eigenvalue of the Hessian is zero, so the regularized Hessian is
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singular. right now, this causes the Cholesky decomposition to return
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`None`, leading to a panic when we unrap
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*/
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let base_step_stacked = hess.cholesky().unwrap().solve(&neg_grad_stacked);
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let base_step = base_step_stacked.reshape_generic(Dyn(element_dim), Dyn(assembly_dim));
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@ -217,17 +224,17 @@ fn realize_gram(
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#[cfg(test)]
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mod tests {
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use std::f64;
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use std::{array, f64::consts::PI};
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use super::*;
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#[test]
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fn sub_proj_test() {
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let target = PartialMatrix(vec![
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MatrixEntry { index: (0, 0), val: 19.0 },
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MatrixEntry { index: (0, 2), val: 39.0 },
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MatrixEntry { index: (1, 1), val: 59.0 },
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MatrixEntry { index: (1, 2), val: 69.0 }
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MatrixEntry { index: (0, 0), value: 19.0 },
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MatrixEntry { index: (0, 2), value: 39.0 },
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MatrixEntry { index: (1, 1), value: 59.0 },
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MatrixEntry { index: (1, 2), value: 69.0 }
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]);
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let attempt = DMatrix::<f64>::from_row_slice(2, 3, &[
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1.0, 2.0, 3.0,
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@ -248,7 +255,7 @@ mod tests {
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for k in 0..3 {
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entries.push(MatrixEntry {
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index: (j, k),
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val: if j == k { 1.0 } else { -1.0 }
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value: if j == k { 1.0 } else { -1.0 }
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});
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}
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}
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@ -266,6 +273,88 @@ mod tests {
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assert!(state.loss.abs() < f64::EPSILON);
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}
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// this problem is from a sangaku by Irisawa Shintarō Hiroatsu. the article
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// below includes a nice translation of the problem statement, which was
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// recorded in Uchida Itsumi's book _Kokon sankan_ (_Mathematics, Past and
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// Present_)
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//
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glen marked this conversation as resolved
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// "Japan's 'Wasan' Mathematical Tradition", by Abe Haruki
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// https://www.nippon.com/en/japan-topics/c12801/
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//
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#[test]
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fn irisawa_hexlet_test() {
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let gram = PartialMatrix({
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let mut entries = Vec::<MatrixEntry>::new();
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for s in 0..9 {
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// each sphere is represented by a spacelike vector
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entries.push(MatrixEntry { index: (s, s), value: 1.0 });
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// the circumscribing sphere is tangent to all of the other
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// spheres, with matching orientation
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if s > 0 {
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entries.push(MatrixEntry { index: (0, s), value: 1.0 });
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entries.push(MatrixEntry { index: (s, 0), value: 1.0 });
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}
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if s > 2 {
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// each chain sphere is tangent to the "sun" and "moon"
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// spheres, with opposing orientation
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for n in 1..3 {
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entries.push(MatrixEntry { index: (s, n), value: -1.0 });
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entries.push(MatrixEntry { index: (n, s), value: -1.0 });
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}
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// each chain sphere is tangent to the next chain sphere,
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// with opposing orientation
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let s_next = 3 + (s-2) % 6;
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entries.push(MatrixEntry { index: (s, s_next), value: -1.0 });
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entries.push(MatrixEntry { index: (s_next, s), value: -1.0 });
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}
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}
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entries
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});
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let guess = DMatrix::from_columns(
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[
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sphere(0.0, 0.0, 0.0, 15.0),
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sphere(0.0, 0.0, -9.0, 5.0),
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sphere(0.0, 0.0, 11.0, 3.0)
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].into_iter().chain(
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(1..=6).map(
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|k| {
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let ang = (k as f64) * PI/3.0;
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sphere(9.0 * ang.cos(), 9.0 * ang.sin(), 0.0, 2.5)
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}
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)
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).collect::<Vec<_>>().as_slice()
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);
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let frozen: [(usize, usize); 4] = array::from_fn(|k| (3, k));
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const SCALED_TOL: f64 = 1.0e-12;
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let (config, success) = realize_gram(
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&gram, guess, &frozen,
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SCALED_TOL, 0.5, 0.9, 1.1, 200, 110
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);
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print!("\nCompleted Gram matrix:{}", config.tr_mul(&*Q) * &config);
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let final_state = SearchState::from_config(&gram, config);
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if success {
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println!("Target accuracy achieved!");
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} else {
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println!("Failed to reach target accuracy");
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}
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println!("Loss: {}", final_state.loss);
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if success {
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println!("\nChain diameters:");
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println!(" {} sun (given)", 1.0 / final_state.config[(3, 3)]);
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for k in 4..9 {
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println!(" {} sun", 1.0 / final_state.config[(3, k)]);
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}
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}
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let entry_tol = SCALED_TOL.sqrt();
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let solution_diams = [30.0, 10.0, 6.0, 5.0, 15.0, 10.0, 3.75, 2.5, 2.0 + 8.0/11.0];
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for (k, diam) in solution_diams.into_iter().enumerate() {
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assert!((final_state.config[(3, k)] - 1.0 / diam).abs() < entry_tol);
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}
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}
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// --- process inspection examples ---
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// these tests are meant for human inspection, not automated use. run them
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@ -281,7 +370,7 @@ mod tests {
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for k in 0..3 {
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entries.push(MatrixEntry {
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index: (j, k),
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val: if j == k { 1.0 } else { -1.0 }
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value: if j == k { 1.0 } else { -1.0 }
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});
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}
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}
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@ -318,7 +407,7 @@ mod tests {
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for k in 0..2 {
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entries.push(MatrixEntry {
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index: (j, k),
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val: if (j, k) == (1, 1) { 1.0 } else { 0.0 }
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value: if (j, k) == (1, 1) { 1.0 } else { 0.0 }
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});
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}
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}
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@ -328,9 +417,10 @@ mod tests {
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point(0.0, 0.0, 2.0),
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sphere(0.0, 0.0, 0.0, 1.0)
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]);
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let frozen = [(3, 0)];
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println!();
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let (config, success) = realize_gram(
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&gram, guess, &[(3, 0)],
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&gram, guess, &frozen,
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1.0e-12, 0.5, 0.9, 1.1, 200, 110
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);
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print!("\nCompleted Gram matrix:{}", config.tr_mul(&*Q) * &config);
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Loading…
Reference in New Issue
Block a user
love that there are tests right in here, we definitely want to keep that up and have them be as pervasive as possible.
Yes, this is one of the recommended ways to organize tests in Rust!